BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E07LP1|AL427023
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1219 1871 0.0
>3x_Contig1219
Length = 5018
Score = 1871 bits (940), Expect = 0.0
Identities = 957/965 (99%), Gaps = 1/965 (0%)
Strand = Plus / Plus
Query: 1 gatcatgccttggattaaatacatcttgagtgaaaaagttttggagaatgaatgtgtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 gatcatgccttggattaaatacatcttgagtgaaaaagttttggagaatgaatgtgtttg 1159
Query: 61 aaattaagagttatttacagtagattaacaactaataaatagtgagataaaagcggtatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 aaattaagagttatttacagtagattaacaactaataaatagtgagataaaagcggtatc 1219
Query: 121 ggaacggggtaagaaattaaatgttcgagatgcttggtaataataaataagtataacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 ggaacggggtaagaaattaaatgttcgagatgcttggtaataataaataagtataacagt 1279
Query: 181 gtagacttctttgaagatacaaacagcattgccttcaattaattcttttggtgatattcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 gtagacttctttgaagatacaaacagcattgccttcaattaattcttttggtgatattcg 1339
Query: 241 tttgttttttcgtctataaacatgataacaaaaaatcatcaaacacttttttacaatggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 tttgttttttcgtctataaacatgataacaaaaaatcatcaaacacttttttacaatggg 1399
Query: 301 agtaaggatggttactttcgagtgggaaataagcaatagcagagttgaacagagtacctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 agtaaggatggttactttcgagtgggaaataagcaatagcagagttgaacagagtacctt 1459
Query: 361 atgaatattttgtagaataaatcattaaatgtgacaacttttttttcatatttttttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1460 atgaatattttgtagaataaatcattaaatgtgacaacttttttttcatatttttttctt 1519
Query: 421 ttattgattccttgtagatggcgatctttcgtttctgttaagcctcttagaaagaaagta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1520 ttattgattccttgtagatggcgatctttcgtttctgttaagcctcttagaaagaaagta 1579
Query: 481 aacaattagaatataatagtcatgattgttcataatcatgaaaaaaaataggaataataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1580 aacaattagaatataatagtcatgattgttcataatcatgaaaaaaaataggaataataa 1639
Query: 541 tataatagtatcagtattctttctccaasnbggggagggggtgggggtgggggttgtaaa 600
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1640 tataatagtatcagtattctttctccaaaggggggagggggtgggggtgggggttgtaaa 1699
Query: 601 aagawcaaaawtgtacctccgaatagacggttcaaagtatgtgtcgtctaagcaagttcg 660
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 aagatcaaaattgtacctccgaatagacggttcaaagtatgtgtcgtctaagcaagttcg 1759
Query: 661 actagtatctaataccagaagagacttctaattgttcgatgattggctgtttaacatttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1760 actagtatctaataccagaagagacttctaattgttcgatgattggctgtttaacatttg 1819
Query: 721 gatgcaaatcattattggtcaaagtcagttgatccttcgtccataagtttggttggggaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1820 gatgcaaatcattattggtcaaagtcagttgatccttcgtccataagtttggttggggaa 1879
Query: 781 cgtggtttggatcaccaacacccaacaaaccgccttgggcttcccagtcacgtacccttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1880 cgtggtttggatcaccaacacccaacaaaccgccttgggcttcccagtcacgtacccttg 1939
Query: 841 gtaattgtwgagtggaccagacatcttccaaagcatccattaagatgtcagatagatcgt 900
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1940 gtaattgtagagtggaccagacatcttccaaagcatccattaagatgtcagatagatcgt 1999
Query: 901 tagtgtggcccggagttggggtaattctcaacctttcggtacctctagcgaccagttggg 960
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2000 tagtgtggcccggagttggggtaattctcaacctttcggtacctctagcga-cagttggg 2058
Query: 961 aartt 965
|| ||
Sbjct: 2059 aagtt 2063
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9134
Number of Sequences: 1807
Number of extensions: 9134
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)